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Latest News

BioBrew Linux Distro v3.0 available
Posted by Ken Farmer, Wednesday April 21 2004 @ 10:50AM EDT

The BioBrew Linux Distribution
Version 3.0 is now available, based on current versions of NPACI Rocks
and RedHat EL.

ABSTRACT: BioBrew Linux is an open source Linux distribution that is enhanced for life scientists. It is customized for cluster and bioinformatics computing. It automates cluster installation, includes all the HPC software a cluster enthusiast needs, and contains popular bioinformatics applications.

A BioBrew cluster running at the Supercomputing Conference, November 2003

BioBrew Linux is "FREE AS IN BEER"! Choose a mirror to download ISOs and documentation:

* Ontario, Canada (HTTP; Optical Carrier 3, 155.52 Mbps leased lines (multiple); courtesy Mike Bloom) * Germany (FTP/HTTP; Optical Carrier 3, 155.52 Mbps leased lines (multiple); courtesy Robert Depenbrock) The primary host and location for older versions of BioBrew Linux, is at Bioinformatics.Org (HTTP; T1, 1.5+ Mbps line)

Printed versions of BioBrew Linux documentation and discs are available for purchase! Proceeds help support Bioinformatics.Org.

INTRODUCTION: BioBrew Linux is an open source Linux distribution based on the NPACI Rocks (www.rocksclusters.org) cluster software and enhanced for bioinformaticists and life scientists. While it looks, feels, and operates like ordinary Red Hat Linux, BioBrew Linux includes popular cluster software e.g. MPICH, LAM-MPI, PVM, Modules, PVFS, Myrinet GM, Sun Grid Engine, gcc, Ganglia, and Globus, *and* popular bioinformatics software e.g. the NCBI toolkit, BLAST, mpiBLAST, HMMER, ClustalW, GROMACS, PHYLIP, WISE, FASTA, and EMBOSS. It runs on everything from notebook computers to large clusters. BioBrew Linux for the x86 architecture is freely available for download at http://bioinformatics.org/ftp/biobrew, a Bioinformatics.Org sponsored and hosted website. BioBrew Linux for the Itanium architecture is only available for purchase at this time through Callident. Please contact Brewmeister Glen Otero for information regarding BioBrew Linux on Itanium.


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Appro: High Performance Computing Resources
IDC: Appro Xtreme-X Supercomputer Blade Solution
Analysis of the Xtreme-X architecture and management system while assessing challenges and opportunities in the technical computing market for blade servers.

Video - The Road to PetaFlop Computing
Explore the Scalable Unit concept where multiple clusters of various sizes can be rapidly built and deployed into production. This new architectural approach yields many subtle benefits to dramatically lower total cost of ownership.
White Paper - Optimized HPC Performance
Multi-core processors provide a unique set of challenges and opportunities for the HPC market. Discover MPI strategies for the Next-Generation Quad-Core Processors.

Appro and the Three National Laboratories
[Appro delivers a new breed of highly scalable, dynamic, reliable and effective Linux clusters to create the next generation of supercomputers for the National Laboratories.

AMD Opteron-based products | Intel Xeon-based products



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